Derek Harmon

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My research focuses on the intended and unintended consequences of language in financial markets. I examine this relationship across a number of contexts, such as the Federal Reserve, initial public offerings, and mergers and acquisitions. More broadly, my work aims to develop new theoretical and methodological approaches to understand the role of language in society.

Yang Chen

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Yang Chen received her Ph.D. (2017) in Statistics from Harvard University and then joined the University of Michigan as an Assistant Professor of Statistics and Research Assistant Professor at the Michigan Institute of Data Science (MIDAS). She received her B.A. in Mathematics and Applied Mathematics from the University of Science and Technology of China. Research interests include computational algorithms in statistical inference and applied statistics in the field of biology and astronomy.

Ding Zhao

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Ding Zhao, PhD, is Assistant Research Scientist in the department of Mechanical Engineering, College of Engineering with a secondary appointment in the Robotics Institute at The University of Michigan, Ann Arbor.

Dr. Zhao’s research interests include autonomous vehicles, intelligent/connected transportation, traffic safety, human-machine interaction, rare events analysis, dynamics and control, machine learning, and big data analysis

 

Peter Adriaens

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My research focus is on the development and application of machine learning tools to large scale financial and unstructured (textual) data to extract, quantify and predict risk profiles and investment grade rating of private and public companies.  Example datasets include social media and financial aggregators such as Bloomberg, Pitchbook, and Privco.

 

Structure of financial data-driven industry ecosystems following relational network mapping and network theory application.

Structure of financial data-driven industry ecosystems following relational network mapping and network theory application.

Murali Mani

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Murali Mani, PhD, is Associate Professor of Computer Science at the University of Michigan, Flint.

The significant research problems Prof. Mani is investigating include the following: big data management, big data analytics and visualization, provenance, query processing of encrypted data, event stream processing, XML stream processing. data modeling using XML schemas, and effective computer science education. In addition, he has worked in industry on clickstream analytics (2015), and on web search engines (1999-2000). Prof. Mani’s significant publications are listed on DBLP at: http://dblp.uni-trier.de/pers/hd/m/Mani:Murali.

Illustrating how our SMART system effectively integrates big data processing and data visualization to enable big data visualization. The left side shows a typical data visualization scenario, where the different analysts are using their different visualization systems. These visualization systems can provide interactive visualizations but cannot handle the complexities of big data. They interact with a distributed data processing system that can handle the complexities of big data. The SMART system improves the user experience by carefully sending additional data to the visualization system in response to a request from an analyst so that future visualization requests can be answered directly by the visualization system without accessing the data processing system.

Illustrating how our SMART system effectively integrates big data processing and data visualization to enable big data visualization. The left side shows a typical data visualization scenario, where the different analysts are using their different visualization systems. These visualization systems can provide interactive visualizations but cannot handle the complexities of big data. They interact with a distributed data processing system that can handle the complexities of big data. The SMART system improves the user experience by carefully sending additional data to the visualization system in response to a request from an analyst so that future visualization requests can be answered directly by the visualization system without accessing the data processing system.

 

Sriram Chandrasekaran

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Sriram Chandrasekaran, PhD, is Assistant Professor of Biomedical Engineering in the College of Engineering at the University of Michigan, Ann Arbor.

Dr. Chandrasekaran’s Systems Biology lab develops computer models of biological processes to understand them holistically. Sriram is interested in deciphering how thousands of proteins work together at the microscopic level to orchestrate complex processes like embryonic development or cognition, and how this complex network breaks down in diseases like cancer. Systems biology software and algorithms developed by his lab are highlighted below and are available at http://www.sriramlab.org/software/.

– INDIGO (INferring Drug Interactions using chemoGenomics and Orthology) algorithm predicts how antibiotics prescribed in combinations will inhibit bacterial growth. INDIGO leverages genomics and drug-interaction data in the model organism – E. coli, to facilitate the discovery of effective combination therapies in less-studied pathogens, such as M. tuberculosis. (Ref: Chandrasekaran et al. Molecular Systems Biology 2016)

– GEMINI (Gene Expression and Metabolism Integrated for Network Inference) is a network curation tool. It allows rapid assessment of regulatory interactions predicted by high-throughput approaches by integrating them with a metabolic network (Ref: Chandrasekaran and Price, PloS Computational Biology 2013)

– ASTRIX (Analyzing Subsets of Transcriptional Regulators Influencing eXpression) uses gene expression data to identify regulatory interactions between transcription factors and their target genes. (Ref: Chandrasekaran et al. PNAS 2011)

– PROM (Probabilistic Regulation of Metabolism) enables the quantitative integration of regulatory and metabolic networks to build genome-scale integrated metabolic–regulatory models (Ref: Chandrasekaran and Price, PNAS 2010)

 

Research Overview: We develop computational algorithms that integrate omics measurements to create detailed genome-scale models of cellular networks. Some clinical applications of our algorithms include finding metabolic vulnerabilities in pathogens (M. tuberculosis) using PROM, and designing multi combination therapeutics for reducing antibiotic resistance using INDIGO.

Research Overview: We develop computational algorithms that integrate omics measurements to create detailed genome-scale models of cellular networks. Some clinical applications of our algorithms include finding metabolic vulnerabilities in pathogens (M. tuberculosis) using PROM, and designing multi combination therapeutics for reducing antibiotic resistance using INDIGO.

Eric Michielssen

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Eric Michielssen, PhD, is Professor of Electrical Engineering and Computer Science, Director of the Michigan Institute for Computational Discovery and Engineering, and Associate Vice President for Advanced Research Computing. His research interests include all aspects of theoretical, applied, and computational electromagnetics, with emphasis on the development of fast (primarily) integral-equation-based techniques for analyzing electromagnetic phenomena. His group studies fast multipole methods for analyzing static and high frequency electronic and optical devices, fast direct solvers for scattering analysis, and butterfly algorithms for compressing matrices that arise in the integral equation solution of large-scale electromagnetic problems. Furthermore, the group works on plane-wave-time-domain algorithms that extend fast multipole concepts to the time domain, and develop time-domain versions of pre-corrected FFT/adaptive integral methods.  Collectively, these algorithms allow the integral equation analysis of time-harmonic and transient electromagnetic phenomena in large-scale linear and nonlinear surface scatterers, antennas, and circuits.  Recently, the group developed powerful Calderon multiplicative preconditioners for accelerating time domain integral equation solvers applied to the analysis of multiscale phenomena, and used the above analysis techniques to develop new closed-loop and multi-objective optimization tools for synthesizing electromagnetic devices, as well as to assist in uncertainty quantification studies relating to electromagnetic compatibility and bioelectromagnetic problems.

Jeffrey S. McCullough

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Jeffrey S. McCullough, PhD, is Associate Professor in the department of Health Management and Policy in the School of Public Health at the University of Michigan, Ann Arbor.

Prof. McCullough’s research focuses on technology and innovation in health care with an emphasis on information technology (IT), pharmaceuticals, and empirical methods.  Many of his studies explored the effect of electronic health record (EHR) systems on health care quality and productivity. While the short-run gains from health IT adoption may be modest, these technologies form the foundation for a health information infrastructure. As scientists are just beginning to understand how to harness and apply medical information, this problem is complicated by the sheer complexity of medical care, the heterogeneity across patients, and the importance of treatment selection. His current work draws on methods from both machine learning and econometrics to address these issues. Current pharmaceutical studies examine the roles of consumer heterogeneity and learning about the value of products as well as the effect of direct-to-consumer advertising on health.

The marginal effects of health IT on mortality by diagnosis and deciles of severity. We study the affect of hospitals' electronic health record (EHR) systems on patient outcomes. While we observe no benefits for the average patient, mortality falls significantly for high-risk patients in all EHR-sensitive conditions. These patterns, combined findings from other analyses, suggest that EHR systems may be more effective at supporting care coordination and information management than at rules-based clinical decision support. McCullough, Parente, and Town, "Health information technology and patient outcomes: the role of information and labor coordination." RAND Journal of Economics, Vol. 47, no. 1 (Spring 2016).

The marginal effects of health IT on mortality by diagnosis and deciles of severity. We study the affect of hospitals’ electronic health record (EHR) systems on patient outcomes. While we observe no benefits for the average patient, mortality falls significantly for high-risk patients in all EHR-sensitive conditions. These patterns, combined findings from other analyses, suggest that EHR systems may be more effective at supporting care coordination and information management than at rules-based clinical decision support. McCullough, Parente, and Town, “Health information technology and patient outcomes: the role of information and labor coordination.” RAND Journal of Economics, Vol. 47, no. 1 (Spring 2016).

Santiago Schnell

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Dr. Schnell works at the interface between biophysical chemistry, mathematical and computational biology, and pathophysiology. As an independent scientist, his primary research interest is to use mathematical, computational and statistical methods to design or select optimal procedures and experiments, and to provide maximum information by analyzing biochemical data. His laboratory deals with the following topics:

(i) Development and implementation of mathematical, computational, and statistical methods to identify and characterize reaction mechanisms.

(ii) Investigate and test performance design of experiments or standards to quantify, interpret and analyze biochemical data.

(iii) Development of new algorithms and software to analyze biochemical data.

The key objective of my research is to create suitable standards and appropriate support of standards leading to reproducible results in the biochemical sciences. Reproducibility is central to scientific credibility. Meta-research has repeatedly shown that accurate reporting and sound peer-review do not by themselves guarantee the reproducibility of scientific results. One of the leading causes of poor reproducibility is limited research efforts in quantitative biology and chemometrics. In my laboratory, we are developing new ways to assess the reproducibility of quantitative findings in the biochemical sciences.

As a team scientist, Dr. Schnell’s research interest is to investigate complex biomedical systems comprising many interacting components, where modeling and theory may aid in the identification of the key mechanisms underlying the behavior of the system as a whole. His collaborators are primarily basic scientists who focus on the identification of molecular, biochemical or developmental mechanisms associated with diseases. To this end, Dr. Schnell’s expertise plays a central role in the identification of these mechanisms. Using mathematical and computational models, Dr. Schnell can formulate several hypothetical model mechanisms in parallel, which are compared with independent experimental data used to construct the models. The resulting comparisons are then independent between models, and any models that satisfy statistical measures of similarity will be used to make predictions, which will be tested experimentally by his collaborators. The model validated by the experiments will be considered the mechanism capable of explaining the behavior of the systems.

Charu Chandra

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My research interests are in developing inter-disciplinary knowledge in System Informatics, as the basis for study of complex system problems with the fusion of theory, computation, and application components adopted from Systems and Informatics fields. In this framework, a complex system such as the supply chain is posited as a System-of-Systems; i.e., a collection of individual business entities organized as a composite system with their resources and capabilities pooled to obtain an interoperable and synergistic system, possessing common and shared goals and objectives. Informatics facilitates coordination and integration in the system by processing and sharing information among supply chain entities for improved decision-making.

A common theme of my research is the basic foundation of universality of system and the realization that what makes it unique is its environment. This has enabled to categorize problems, designs, models, methodologies, and solution techniques at macro and micro levels and develop innovative solutions by coordinating these levels in an integrated environment.

My goal is to study the efficacy of the body of knowledge available in Systems Theory, Information Science, Artificial Intelligence & Knowledge Management, Management Science, Industrial Engineering and Operations Research fields; applied uniquely to issues and problems of complex systems in the manufacturing and service sectors.

Theoretical work investigated by me in this research thrust relates to:

  • Developing Generalized System Taxonomies and Ontologies for complex systems management.
  • Experimenting with Problem Taxonomies for design and modeling efficiencies in complex system networks.
  • Developing methodologies, frameworks and reference models for complex systems management.
  • Computation and application development focused on developing algorithms and software development for:
    • Supply chain information system and knowledge library using Web-based technology as a dissemination tool.
    • Integration with Enterprise Resource Planning modules in SAP software.
    • Supply chain management problem-solving through application of problem specific simulation and optimization.

My research has extended to application domains in healthcare, textiles, automotive, and defense sectors. Problems and issues addressed relate to health care management, operationalizing of sustainability, energy conservation, global logistics management, mega-disaster recovery, humanitarian needs management, and entrepreneurship management.

Currently, my application focus is on expanding the breadth and depth of inquiry in the healthcare domain. Among the topics being investigated are: (1) the organization and structure of health care enterprises; and (2) operations and strategies that relate to management of critical success factors, such as costs, quality, innovation and technology adoption by health care providers. Two significant topics that I have chosen to study with regard to care for elderly patients suffering from chronic congestive heart failure and hypertension are: (1) the design of patient-centered health care delivery to improve quality of care; and (2) managing enhanced care costs due to readmission of these patients.

Data science applications: Real-time data processing in supply chains, Knowledge portals for decision-making in supply chains, information sharing for optimizing patient-centered healthcare delivery