HPC training workshops begin Monday, May 15

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series of training workshops in high performance computing will be held May 15, May 17 and May 24, 2017, presented by CSCAR in conjunction with Advanced Research Computing – Technology Services (ARC-TS). All sessions are held at East Hall, Room B254, 530 Church St.

Introduction to the Linux command Line
This course will familiarize the student with the basics of accessing and interacting with Linux computers using the GNU/Linux operating system’s Bash shell, also known as the “command line.”
• Monday, May 15, 9 a.m. – noon. (full descriptionregistration)

Introduction to the Flux cluster and batch computing
This workshop will provide a brief overview of the components of the Flux cluster, including the resource manager and scheduler, and will offer students hands-on experience.
• Wednesday, May 17, 1 – 4:30 p.m. (full description | registration)

Advanced batch computing on the Flux cluster
This course will cover advanced areas of cluster computing on the Flux cluster, including common parallel programming models, dependent and array scheduling, and a brief introduction to scientific computing with Python, among other topics.
• Wednesday, May 24, 1 – 5 p.m. (full description | registration)

NOTE: Additional workshops may be scheduled if demand warrants. Please sign up for the waiting list if the workshops are full, and you will be given first priority for any additional sessions.

New private insurance claims dataset and analytic support now available to health care researchers

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The Institute for Healthcare Policy and Innovation (IHPI) is partnering with Advanced Research Computing (ARC) to bring two commercial claims datasets to campus researchers.

The OptumInsight and Truven Marketscan datasets contain nearly complete insurance claims and other health data on tens of millions of people representing the US private insurance population. Within each dataset, records can be linked longitudinally for over 5 years.  

To begin working with the data, researchers should submit a brief analysis plan for review by IHPI staff, who will create extracts or grant access to primary data as appropriate.

CSCAR consultants are available to provide guidance on computational and analytic methods for a variety of research aims, including use of Flux and other UM computing infrastructure for working with these large and complex repositories.

Contact Patrick Brady (pgbrady@umich.edu) at IHPI or James Henderson (jbhender@umich.edu) at CSCAR for more information.

The data acquisition and availability was funded by IHPI and the U-M Data Science Initiative.

MIDAS starting research group on mobile sensor analytics

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The Michigan Institute for Data Science (MIDAS) is convening a research working group on mobile sensor analytics. Mobile sensors are taking on an increasing presence in our lives. Wearable devices allow for physiological and cognitive monitoring, and behavior modeling for health maintenance, exercise, sports, and entertainment. Sensors in vehicles measure vehicle kinematics, record driver behavior, and increase perimeter awareness. Mobile sensors are becoming essential in areas such as environmental monitoring and epidemiological tracking.

There are significant data science opportunities for theory and application in mobile sensor analytics, including real-time data collection, streaming data analysis, active on-line learning, mobile sensor networks, and energy efficient mobile computing.

Our working group welcomes researchers with interest in mobile sensor analytics in any scientific domain, including but not limited to health, transportation, smart cities, ecology and the environment.

Where and When:

Noon to 2 pm, April 13, 2017

School of Public Health I, Room 7625

Lunch provided

Agenda:

  • Brief presentations about challenges and opportunities in mobile sensor analytics (theory and application);

  • A brief presentation of a list of funding opportunities;

  • Discussion of research ideas and collaboration in the context of grant application and industry partnership.

Future Plans: Based on the interest of participants, MIDAS will alert researchers to relevant funding opportunities, hold follow-up meetings for continued discussion and team formation as ideas crystalize for grant applications, and work with the UM Business Engagement Center to bring in industry partnership.

Please RSVP.  For questions, please contact Jing Liu, Ph.D, MIDAS research specialist (ljing@umich.edu; 734-764-2750).

Gilbert, Rudelson, Wu named Simons Foundation Fellows in Mathematics

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Three University of Michigan professors have been named Simons Fellows in Mathematics by the Simons Foundation:

  • Anna Gilbert, the Herman H. Goldstine Collegiate Professor of Mathematics, core faculty member at the Michigan Institute for Data Science (MIDAS), and Professor of Electrical and Computer Engineering
  • Mark Rudelson, Professor of Mathematics
  • Sijue Wu, Robert W. and Lynn H. Browne Professor of Science and Professor of Mathematics.

Forty fellows were named in all.

The fellowships provide funding that allows faculty to take up to a semester-long research leave from teaching and administrative duties. The foundation also gives fellowships in Theoretical Physics.

For more information, see www.simonsfoundation.org.

Workshop co-chaired by MIDAS co-director Prof. Hero releases proceedings on inference in big data

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The National Academies Committee on Applied and Theoretical Statistics has released proceedings from its June 2016 workshop titled “Refining the Concept of Scientific Inference When Working with Big Data,” co-chaired by Alfred Hero, MIDAS co-director and the John H Holland Distinguished University Professor of Electrical Engineering and Computer Science.

The report can be downloaded from the National Academies website.

The workshop explored four key issues in scientific inference:

  • Inference about causal discoveries driven by large observational data
  • Inference about discoveries from data on large networks
  • Inference about discoveries based on integration of diverse datasets
  • Inference when regularization is used to simplify fitting of high-dimensional models.

The workshop brought together statisticians, data scientists and domain researchers from different biomedical disciplines in order to identify new methodological developments that hold significant promise, and to highlight potential research areas for the future. It was partially funded by the National Institutes of Health Big Data to Knowledge Program, and the National Science Foundation Division of Mathematical Sciences.

Emily Mower Provost Receives NSF CAREER Award to Develop Emotion and Mood Recognition for Mental Health Monitoring and Treatment

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Prof. Emily Mower Provost has been awarded an NSF CAREER grant for her research project, “Automatic Speech-Based Longitudinal Emotion and Mood Recognition for Mental Health Monitoring and Treatment.”

Prof. Mower Provost’s research interests are in human-centered speech and video processing, multimodal interfaces design, and speech-based assistive technology. The goals of her research are motivated by the complexities of human emotion expression and perception.

More information about the project is available from the College of Engineering and Prof. Mower Provost’s CAREER Award Posting by NSF.

Ambuj Tewari selected as 2017 Alfred P. Sloan Research Fellow in Computer Science

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Ambuj Tewari is one of seven U-M scientists selected for Sloan Fellowships.  Dr. Tewari obtained his PhD from UC Berkeley, and joined the University of Michigan as Assistant Professor of Statistics in 2012.  He also holds a courtesy appointment at the Department of Electrical Engineering and Computer Science.  Dr. Tewari is also an Affiliate Faculty member in MIDAS.

The two-year, $60,000 fellowships are awarded to scientists “in recognition of distinguished performance and a unique potential to make substantial contributions to their field,” according to the organization’s website. Researchers are considered based on nominations, and then selected by an independent panel of senior scientists.

The Alfred P. Sloan Foundation supports early career researchers in eight fields, including chemistry, computational and evolutionary molecular biology, computer science, economics, mathematics, neuroscience, ocean sciences, and physics.

For more information, please see the U-M news release.

MDST announces Detroit blight data challenge; organizational meeting Feb. 16

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The Michigan Data Science Team and the Michigan Student Symposium for Interdisciplinary Statistical Sciences (MSSISS) have partnered with the City of Detroit on a data challenge that seeks to answer the question: How can blight ticket compliance be increased?

An organizational meeting is scheduled for Thursday, Feb. 16 at 5:30 p.m. in EECS 1200.

The city is making datasets available containing building permits, trades permits, citizens complaints, and more.

The competition runs through March 15. For more information, see the competition website.

Data science institutes at University of Michigan and University College London sign academic cooperation agreement

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From left, Al Hero, U-M; Patrick Wolfe, UCL; and Brian Athey, U-M signed an agreement for research and educational cooperation between the University of Michigan and University College London.

From left, Al Hero, U-M; Patrick Wolfe, UCL; and Brian Athey, U-M signed an agreement for research and educational cooperation between the University of Michigan and University College London.

ANN ARBOR, MI and LONDON — The Michigan Institute of Data Science (MIDAS) at the University of Michigan and the Centre for Data Science and Big Data Institute at UCL (University College London) have signed a five-year agreement of scientific and academic cooperation.

The agreement sets the stage for collaborative research projects between faculty of both institutions; student exchange opportunities; and visiting scholar arrangements, among other potential partnerships.

“There is a lot of common ground in what we do,” said Patrick Wolfe, Executive Director of UCL’s Centre for Data Science and Big Data Institute. “Both MIDAS and UCL cover the full spectrum of data science domains, from smart cities to healthcare to transportation to financial services, and both promote cross-cutting collaboration between scientific disciplines.”

Alfred Hero, co-director of MIDAS and professor of Electrical Engineering and Computer Science at U-M, said that one of the original goals of the institute when it was founded in 2015 under U-M’s $100 million Data Science Initiative was to reach out to U.S. and international partners.

“It seemed very natural that this would be the next step,” Hero said, adding that it would complement MIDAS’s recent partnership with the Shenzhen Research Institute of Big Data in China. “UCL epitomizes the collaboration, multi-disciplinarity and multi-institutional involvement that we’re trying to establish in our international partnerships.”

Wolfe visited Ann Arbor in early January to sign a memorandum of understanding along with Hero and Brian Athey, professor of bioinformatics and the other MIDAS co-director.

The agreement lists several potential areas of cooperation, including:

  • joint research projects
  • exchange of academic publications and reports
  • sharing of teaching methods and course design
  • joint symposia, workshops and conferences
  • faculty development and exchange
  • student exchange
  • exchange of visiting research scholars.

Links:

MIDAS at U-M

UCL Big Data Institute

Follow UCL’s data science activities @uclbdi

Follow MIDAS at @ARC_UM

MIDAS Co-Director Al Hero receives 2016-2017 Stephen S. Attwood Award

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Al Hero, Co-Director for the Michigan Institute for Data Science (MIDAS), has received the 2016-2017 Stephen S. Attwood Award, the highest honor awarded to a faculty member by the College of Engineering for “extraordinary achievement in teaching, research, service, and other activities that have brought distinction to the College and University.”  More information on this prestigious honor are at http://eecs.umich.edu/eecs/about/articles/2017/al-hero-receives-coe-stephen-attwood-award.html.